Solr Queries

Gene Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 777,030 (+280)
Mus musculus 246,002 (+292)
Homo sapiens 221,426 (+8)
Caenorhabditis elegans 80,708 (0)
Danio rerio 70,734 (+48)
Saccharomyces cerevisiae S288C 68,281 (0)
Drosophila melanogaster 66,438 (0)
organism 17,941 (0)
Rattus norvegicus 558 (0)
Canis lupus familiaris 476 (0)
Drosophila hydei 463 (0)
Drosophila subobscura 377 (0)
Drosophila virilis 341 (0)
Drosophila ananassae 270 (0)
Drosophila simulans 208 (0)
Drosophila pseudoobscura pseudoobscura 206 (0)
Drosophila willistoni 193 (0)
Bos taurus 163 (0)
Drosophila robusta 153 (0)
Drosophila funebris 133 (0)
Felis catus 132 (0)
Drosophila busckii 124 (0)
Drosophila americana texana 118 (0)
Drosophila americana americana 82 (0)
Drosophila kikkawai 82 (0)
Staphylococcus aureus 79 (+49)
Drosophila immigrans 72 (0)
Scaptomyza pallida 69 (0)
Drosophila affinis 63 (0)
Human immunodeficiency virus 1 63 (-55)
Ovis aries 57 (0)
Drosophila prosaltans 56 (0)
Drosophila buzzatii 55 (0)
Drosophila mauritiana 52 (0)
Drosophila paulistorum 49 (0)
Drosophila miranda 43 (0)
Candida albicans 34 (+34)
Drosophila littoralis 34 (0)
Drosophila bifasciata 33 (0)
Human gammaherpesvirus 8 32 (+30)
Equus caballus 31 (0)
Sus scrofa 31 (0)
Human alphaherpesvirus 2 30 (+30)
Listeria monocytogenes 30 (+30)
Serratia marcescens 30 (+30)
Drosophila ambigua 27 (0)
Drosophila transversa 22 (0)
Hepacivirus C 21 (+20)
Gallus gallus 19 (0)
Capra hircus 18 (0)
Phoenicopterus ruber 17 (0)
Drosophila biarmipes 15 (0)
Drosophila persimilis 14 (0)
Zaprionus indianus 14 (0)
Drosophila obscura 13 (0)
Drosophila phalerata 13 (0)
Drosophila mojavensis 12 (0)
Drosophila auraria 11 (0)
Drosophila mercatorum mercatorum 11 (0)
Pichia kudriavzevii 11 (0)
Drosophila tropicalis 10 (0)
Mustela putorius furo 10 (0)
Oryctolagus cuniculus 10 (0)
Vaccinia virus 10 (+10)
Drosophila sechellia 9 (0)
Mycobacterium tuberculosis 8 (+7)
Drosophila aldrichi 7 (0)
Drosophila bipectinata 7 (0)
Drosophila repleta 7 (0)
Drosophila mediopunctata 6 (0)
Drosophila novamexicana 6 (0)
Human rhinovirus B3 6 (+6)
Escherichia coli ATCC 25922 5 (+5)
Drosophila crucigera 4 (0)
Drosophila gaucha 4 (0)
Drosophila pallidosa 4 (0)
Human alphaherpesvirus 3 4 (+4)
Macaca mulatta 4 (0)
Neovison vison 4 (0)
Oryzias latipes 4 (0)
Scaptodrosophila rufifrons 4 (0)
Drosophila equinoxialis 3 (0)
Drosophila malerkotliana 3 (0)
Drosophila melanica 3 (0)
Drosophila metzii 3 (0)
Drosophila nigromaculata 3 (0)
Drosophila prostipennis 3 (0)
Drosophila pseudoobscura bogotana 3 (0)
Drosophila takahashii 3 (0)
Meleagris gallopavo 3 (0)
Mesocricetus auratus 3 (0)
Bubalus bubalis 2 (0)
Chymomyza costata 2 (0)
Drosophila acutilabella 2 (0)
Drosophila albomicans 2 (0)
Drosophila arizonae 2 (0)
Drosophila cardini 2 (0)
Drosophila elegans 2 (0)
Drosophila erecta 2 (0)
Drosophila eugracilis 2 (0)
Drosophila gibberosa 2 (0)
Drosophila madeirensis 2 (0)
Drosophila malerkotliana malerkotliana 2 (0)
Drosophila mimica 2 (0)
Drosophila nasuta 2 (0)
Drosophila nebulosa 2 (0)
Drosophila similis similis 2 (0)
Drosophila tripunctata 2 (0)
Hepatitis C virus subtype 2a 2 (+2)
Jaagsiekte sheep retrovirus 2 (+2)
Salmonella 2 (+2)
Scaptodrosophila lebanonensis 2 (0)
Vulpes vulpes 2 (0)
Acinonyx jubatus 1 (0)
Anser caerulescens caerulescens 1 (0)
Aspidoscelis inornatus 1 (0)
Bacillus megaterium 1 (+1)
Bos grunniens 1 (0)
Chaetodipus intermedius 1 (0)
Coereba flaveola 1 (0)
Coturnix japonica 1 (0)
Dengue virus group 1 (0)
Drosophila ararama 1 (0)
Drosophila falleni 1 (0)
Drosophila guttifera 1 (0)
Drosophila lutescens 1 (0)
Drosophila mulleri 1 (0)
Drosophila nigrospiracula 1 (0)
Drosophila pachea 1 (0)
Drosophila tristis 1 (0)
Drosophila yakuba 1 (0)
Holbrookia maculata 1 (0)
Mammuthus primigenius 1 (0)
Micropterus salmoides 1 (0)
NCBITaxon:61402 1 (0)
Numida meleagris 1 (0)
Panthera onca 1 (0)
Panthera tigris tigris 1 (0)
Peromyscus polionotus 1 (0)
Schizosaccharomyces pombe 1 (0)
Schizosaccharomyces pombe 972h- 1 (0)
Sciurus carolinensis 1 (0)
Ursus americanus 1 (0)
Vulpes lagopus 1 (0)
Zaprionus sepsoides 1 (0)
Zaprionus tuberculatus 1 (0)
Other 0 (0)
Escherichia coli 0 (-81)
Hepatitis B virus 0 (-75)
Human alphaherpesvirus 1 0 (-62)
Bacillus subtilis 0 (-20)
Human betaherpesvirus 5 0 (-18)
Severe acute respiratory syndrome-related coronavirus 0 (-9)
HIV-1 M:C_ETH2220 0 (-5)
Staphylococcus aureus subsp. aureus 0 (-5)

Gene Phenotype Associations By Source

Production Query

Dev Query

source count
Total 777,030 (+280)
mgislim 243,774 (+292)
hpoa 158,189 (-60)
orphanet 128,755 (0)
omim 95,479 (+2)
wormbase 80,587 (0)
flybase 74,770 (0)
gwascatalog 71,353 (0)
sgd 68,275 (0)
zfinslim 67,341 (+48)
clinvar 27,000 (0)
impc 21,463 (0)
mgi 20,720 (0)
go 12,098 (0)
zfin 9,241 (0)
coriell 7,777 (+6)
mmrrc 7,736 (0)
omia 1,009 (0)
monarch 988 (0)
rgd 553 (0)
Other 0 (0)

Gene Variant Associations By Taxa

Production Query

Dev Query

species count
Total 974,282 (+153)
Mus musculus 457,274 (+82)
Homo sapiens 196,206 (-166)
Drosophila melanogaster 189,468 (0)
Caenorhabditis elegans 63,343 (0)
Danio rerio 22,482 (+31)
Bos taurus 19,157 (0)
organism 15,365 (0)
Sus scrofa 3,344 (0)
Gallus gallus 1,647 (0)
Drosophila ananassae 601 (0)
Drosophila virilis 574 (0)
Drosophila subobscura 536 (0)
Drosophila hydei 523 (0)
Drosophila simulans 435 (0)
Drosophila pseudoobscura pseudoobscura 336 (0)
Equus caballus 235 (0)
Drosophila willistoni 206 (0)
Drosophila funebris 177 (0)
Drosophila americana texana 149 (0)
Staphylococcus aureus 140 (+119)
Drosophila kikkawai 123 (0)
Drosophila mauritiana 122 (0)
Drosophila robusta 122 (0)
Drosophila buzzatii 121 (0)
Drosophila americana americana 95 (0)
Drosophila immigrans 91 (0)
Drosophila busckii 88 (0)
Drosophila miranda 88 (0)
Drosophila affinis 58 (0)
Scaptomyza pallida 53 (0)
Zaprionus indianus 52 (0)
Drosophila mulleri 50 (0)
Human alphaherpesvirus 2 49 (+49)
Human gammaherpesvirus 8 47 (+44)
Drosophila mojavensis 45 (0)
Drosophila affinidisjuncta 42 (0)
Drosophila teissieri 41 (0)
Drosophila persimilis 39 (0)
Drosophila prosaltans 39 (0)
Drosophila littoralis 35 (0)
Drosophila paulistorum 32 (0)
Drosophila takahashii 30 (0)
Drosophila lutescens 27 (0)
Hepacivirus C 27 (+26)
Human immunodeficiency virus 1 27 (-8)
Drosophila arizonae 26 (0)
Drosophila bifasciata 26 (0)
Drosophila jambulina 24 (0)
Drosophila punjabiensis 24 (0)
Drosophila sechellia 23 (0)
Pichia kudriavzevii 23 (0)
Serratia marcescens 21 (+21)
Drosophila ambigua 19 (0)
Drosophila bipectinata 18 (0)
Drosophila phalerata 18 (0)
Drosophila transversa 17 (0)
Drosophila auraria 14 (0)
Drosophila biarmipes 14 (0)
Drosophila obscura 14 (0)
Drosophila hawaiiensis 12 (0)
Drosophila mercatorum mercatorum 12 (0)
Escherichia coli ATCC 25922 11 (+11)
Human rhinovirus B3 10 (+10)
Mycobacterium tuberculosis 10 (+9)
Drosophila malerkotliana 9 (0)
Drosophila yakuba 9 (0)
Drosophila malerkotliana malerkotliana 8 (0)
Drosophila mediopunctata 8 (0)
Drosophila novamexicana 8 (0)
Listeria monocytogenes 8 (+8)
Ovis aries 7 (0)
Scaptodrosophila lebanonensis 7 (0)
Drosophila albomicans 6 (0)
Drosophila grimshawi 6 (0)
Drosophila prostipennis 6 (0)
Drosophila repleta 6 (0)
Drosophila tropicalis 6 (0)
Human gammaherpesvirus 4 6 (+6)
Vaccinia virus 6 (+6)
Chymomyza costata 5 (0)
Drosophila pachea 5 (0)
Hirtodrosophila confusa 5 (0)
Human alphaherpesvirus 3 5 (+5)
Drosophila aldrichi 4 (0)
Drosophila elegans 4 (0)
Drosophila eugracilis 4 (0)
Jaagsiekte sheep retrovirus 4 (+4)
Candida albicans 3 (+3)
Drosophila azteca 3 (0)
Drosophila metzii 3 (0)
Drosophila pallidosa 3 (0)
Hepatitis C virus subtype 2a 3 (+3)
Pseudomonas aeruginosa 3 (+3)
Salmonella 3 (+3)
Drosophila crucigera 2 (0)
Drosophila equinoxialis 2 (0)
Drosophila erecta 2 (0)
Drosophila falleni 2 (0)
Drosophila gaucha 2 (0)
Drosophila madeirensis 2 (0)
Drosophila nasuta 2 (0)
Drosophila nigrospiracula 2 (0)
Drosophila pseudoobscura bogotana 2 (0)
Scaptodrosophila rufifrons 2 (0)
Zaprionus sepsoides 2 (0)
Zaprionus tuberculatus 2 (0)
Bacillus megaterium 1 (+1)
Dengue virus group 1 (-2)
Drosophila acutilabella 1 (0)
Drosophila ararama 1 (0)
Drosophila athabasca 1 (0)
Drosophila borealis 1 (0)
Drosophila cardini 1 (0)
Drosophila gibberosa 1 (0)
Drosophila guttifera 1 (0)
Drosophila melanica 1 (0)
Drosophila mimica 1 (0)
Drosophila nebulosa 1 (0)
Drosophila nigromaculata 1 (0)
Drosophila orena 1 (0)
Drosophila similis similis 1 (0)
Drosophila tripunctata 1 (0)
Drosophila tristis 1 (0)
Human alphaherpesvirus 1 1 (-10)
Other 0 (0)
Escherichia coli 0 (-30)
Hepatitis B virus 0 (-16)
Human betaherpesvirus 5 0 (-14)
HIV-1 M:C_ETH2220 0 (-13)
Bacillus subtilis 0 (-11)
Staphylococcus aureus subsp. aureus 0 (-11)
Severe acute respiratory syndrome-related coronavirus 0 (-8)
NCBITaxon:467705 0 (-2)

Gene Variant Associations By Source

Production Query

Dev Query

source count
Total 974,282 (+153)
mgi 455,637 (+82)
flybase 200,669 (0)
gwascatalog 89,856 (0)
clinvar 85,834 (-4)
wormbase 63,339 (0)
omim 29,162 (+44)
animalqtldb 25,717 (0)
zfin 22,800 (+31)
mmrrc 14,040 (+8)
impc 5,288 (0)
Other 0 (0)

Gene Disease Causal Associations By Taxa

Production Query

Dev Query

species count
Total 9,056 (+3)
Homo sapiens 9,035 (+7)
Mus musculus 9 (0)
Human gammaherpesvirus 8 3 (+3)
Candida albicans 2 (+2)
Listeria monocytogenes 2 (+2)
Serratia marcescens 2 (+2)
Hepacivirus C 1 (+1)
Human immunodeficiency virus 1 1 (-4)
Pichia kudriavzevii 1 (0)
Other 0 (0)
Bacillus subtilis 0 (-2)
Escherichia coli 0 (-2)
Hepatitis B virus 0 (-2)
Human alphaherpesvirus 1 0 (-2)
Staphylococcus aureus 0 (-2)

Gene Disease Causal Associations By Source

Production Query

Dev Query

species count
Total 9,056 (+3)
omim 6,196 (+3)
orphanet 6,144 (0)
clinvar 889 (0)
mgislim 9 (0)
gwascatalog 8 (0)
mgi 6 (0)
mmrrc 2 (0)
impc 1 (0)
Other 0 (0)

Gene Disease Non-causal Associations By Taxa

Production Query

Dev Query

species count
Total 27,914 (+11)
Homo sapiens 24,928 (-37)
organism 2,172 (0)
Canis lupus familiaris 230 (0)
Bos taurus 120 (0)
Felis catus 62 (0)
Staphylococcus aureus 48 (+48)
Ovis aries 47 (0)
Gallus gallus 41 (0)
Equus caballus 39 (0)
Sus scrofa 38 (0)
Capra hircus 15 (0)
Oryctolagus cuniculus 12 (0)
Coturnix japonica 9 (0)
Equus asinus 5 (0)
Hepacivirus C 5 (+5)
Human alphaherpesvirus 2 5 (+5)
Listeria monocytogenes 5 (+5)
Neovison vison 5 (0)
Bubalus bubalis 4 (0)
Mesocricetus auratus 4 (0)
Mycobacterium tuberculosis 4 (+4)
Pseudomonas aeruginosa 4 (+4)
Bos grunniens 3 (0)
Calidris pugnax 3 (0)
Dengue virus group 3 (0)
Human gammaherpesvirus 4 3 (+3)
Human gammaherpesvirus 8 3 (+2)
Human immunodeficiency virus 1 3 (-4)
Macaca mulatta 3 (0)
Oryzias latipes 3 (0)
Vulpes lagopus 3 (0)
Acinonyx jubatus 2 (0)
Geospiza fortis 2 (0)
Human alphaherpesvirus 3 2 (+2)
Macaca fascicularis 2 (0)
Mammuthus primigenius 2 (0)
Meleagris gallopavo 2 (0)
Mustela putorius furo 2 (0)
Vulpes vulpes 2 (0)
Aepyceros melampus 1 (0)
Anas platyrhynchos 1 (0)
Anser caerulescens caerulescens 1 (0)
Aspidoscelis inornatus 1 (0)
Astyanax 1 (0)
Bacillus megaterium 1 (+1)
Balaenoptera acutorostrata 1 (0)
Balaenoptera omurai 1 (0)
Bos mutus 1 (0)
Camelus dromedarius 1 (0)
Candida albicans 1 (+1)
Canis latrans 1 (0)
Canis lupus 1 (0)
Catopuma temminckii 1 (0)
Cavia porcellus 1 (0)
Chaetodipus intermedius 1 (0)
Coereba flaveola 1 (0)
Columba livia 1 (0)
Coturnix coturnix 1 (0)
Ctenopharyngodon idella 1 (0)
Delphinapterus leucas 1 (0)
Delphinus capensis 1 (0)
Dromaius novaehollandiae 1 (0)
Elephas maximus 1 (0)
Falco cherrug 1 (0)
Falco rusticolus 1 (0)
Gorilla gorilla 1 (0)
Holbrookia maculata 1 (0)
Human alphaherpesvirus 1 1 (+1)
Hylobates agilis 1 (0)
Hylobates lar 1 (0)
Jaagsiekte sheep retrovirus 1 (+1)
Lacerta 1 (0)
Leopardus colocolo 1 (0)
Leopardus geoffroyi 1 (0)
Leopardus guigna 1 (0)
Lipotes vexillifer 1 (0)
Macaca fuscata 1 (0)
Megaptera novaeangliae 1 (0)
Monarcha castaneiventris 1 (0)
NCBITaxon:61402 1 (0)
NCBITaxon:9870 1 (0)
Neophocaena phocaenoides 1 (0)
Numida meleagris 1 (0)
Oreochromis niloticus 1 (0)
Pan troglodytes 1 (0)
Panthera onca 1 (0)
Panthera pardus 1 (0)
Panthera tigris 1 (0)
Panthera tigris tigris 1 (0)
Peromyscus maniculatus 1 (0)
Peromyscus polionotus 1 (0)
Phoenicopterus ruber 1 (0)
Pichia kudriavzevii 1 (0)
Prionailurus bengalensis 1 (0)
Rattus norvegicus 1 (0)
Salmonella 1 (+1)
Sapajus apella 1 (0)
Sciurus carolinensis 1 (0)
Spinus cucullatus 1 (0)
Stercorarius parasiticus 1 (0)
Streptopelia risoria 1 (0)
Sula leucogaster 1 (0)
Sula sula 1 (0)
Sus scrofa domesticus 1 (0)
Symphalangus syndactylus 1 (0)
Takifugu rubripes 1 (0)
Tursiops truncatus 1 (0)
Ursus americanus 1 (0)
Other 0 (0)
Escherichia coli 0 (-18)
Human betaherpesvirus 5 0 (-7)
HIV-1 M:C_ETH2220 0 (-3)
NCBITaxon:467705 0 (-2)
Severe acute respiratory syndrome-related coronavirus 0 (-1)

Gene Disease Non-Causal Associations By Source

Production Query

Dev Query

species count
Total 27,914 (+11)
gwascatalog 22,730 (0)
omim 3,577 (+11)
orphanet 1,273 (0)
omia 725 (0)
clinvar 146 (0)
coriell 41 (0)
mgi 2 (0)
mgislim 2 (0)
udp 2 (0)
Other 0 (0)

Gene Homology By Subject Taxa

Production Query

Dev Query

source count
Total 7,052,361 (0)
Danio rerio 586,404 (0)
Xenopus tropicalis 519,449 (0)
Mus musculus 487,115 (0)
Rattus norvegicus 480,425 (0)
Equus caballus 467,624 (0)
Sus scrofa 441,042 (0)
Homo sapiens 408,862 (+84)
Monodelphis domestica 373,581 (0)
Bos taurus 363,603 (0)
Drosophila melanogaster 362,403 (0)
Canis lupus familiaris 360,524 (0)
Caenorhabditis elegans 350,098 (0)
Gallus gallus 337,652 (0)
Pan troglodytes 281,706 (0)
Anolis carolinensis 274,530 (0)
Macaca mulatta 261,933 (0)
Felis catus 249,236 (0)
Ornithorhynchus anatinus 202,167 (0)
Dictyostelium discoideum 85,150 (0)
Saccharomyces cerevisiae S288C 73,458 (0)
Schizosaccharomyces pombe 972h- 49,331 (+23)
Schizosaccharomyces pombe 18,578 (-23)
Escherichia coli 8,689 (-84)
Arabidopsis thaliana 7,173 (0)
organism 355 (0)
Staphylococcus aureus 289 (+185)
Mycobacterium tuberculosis 193 (-2)
Human immunodeficiency virus 1 139 (-91)
Human alphaherpesvirus 3 87 (+87)
Hepacivirus C 80 (+59)
Bacillus megaterium 68 (-19)
Serratia marcescens 39 (+39)
Salmonella 35 (+35)
Listeria monocytogenes 32 (+32)
Human alphaherpesvirus 1 31 (-17)
Dengue virus group 29 (+28)
Candida albicans 27 (+27)
Hepatitis C virus subtype 2a 22 (+22)
Human rhinovirus B3 22 (+22)
Lactobacillus acidophilus 21 (+21)
Pseudomonas aeruginosa 21 (+13)
Human gammaherpesvirus 8 18 (+4)
Pichia kudriavzevii 18 (0)
Vaccinia virus 18 (+18)
Pseudomonas fluorescens 17 (+17)
Escherichia coli ATCC 25922 16 (-50)
Jaagsiekte sheep retrovirus 16 (0)
Influenza A virus A
Human gammaherpesvirus 4 12 (+12)
Human alphaherpesvirus 2 10 (+10)
Other 0 (0)
Human betaherpesvirus 5 0 (-97)
Candida albicans SC5314 0 (-93)
NCBITaxon:1319 0 (-80)
Bacillus subtilis 0 (-72)
Hepatitis B virus 0 (-20)
Staphylococcus saprophyticus 0 (-19)
HIV-1 M:C_ETH2220 0 (-17)
Severe acute respiratory syndrome-related coronavirus 0 (-16)
Staphylococcus aureus subsp. aureus 0 (-16)
Human orthopneumovirus 0 (-15)
Rhizopus oryzae 0 (-15)
NCBITaxon:467705 0 (-5)

Gene Interactions By Source

Production Query

Dev Query

source count
Total 4,110,249 (0)
string 3,112,187 (0)
biogrid 1,170,138 (0)
Other 0 (0)

Gene Interactions By Subject Taxa

Production Query

Dev Query

source count
Total 4,110,249 (0)
Homo sapiens 1,592,476 (-1,014)
Mus musculus 775,407 (0)
Rattus norvegicus 597,052 (0)
Drosophila melanogaster 471,054 (0)
Caenorhabditis elegans 361,172 (0)
Danio rerio 293,087 (0)
organism 13,255 (0)
Hepacivirus C 835 (+713)
Human immunodeficiency virus 1 738 (-400)
Listeria monocytogenes 695 (+695)
Human alphaherpesvirus 1 473 (+361)
Dengue virus group 465 (+429)
Bacillus megaterium 372 (-431)
Human rhinovirus B3 353 (+353)
Hepatitis C virus subtype 2a 342 (+342)
Staphylococcus aureus 318 (+164)
Human alphaherpesvirus 3 271 (+271)
Mycobacterium tuberculosis 251 (+51)
Human gammaherpesvirus 8 237 (-59)
Human gammaherpesvirus 4 233 (+233)
Pseudomonas aeruginosa 201 (+124)
Vaccinia virus 184 (+184)
Escherichia coli ATCC 25922 138 (+42)
Serratia marcescens 126 (+126)
Influenza A virus A
Pichia kudriavzevii 89 (0)
Human alphaherpesvirus 2 81 (+81)
Candida albicans 76 (+76)
Escherichia coli DH1 54 (-28)
Jaagsiekte sheep retrovirus 41 (+4)
Klebsiella pneumoniae 29 (+29)
Salmonella 12 (+12)
Other 12 (0)
Lactobacillus acidophilus 11 (+11)
Pseudomonas fluorescens 1 (+1)
Escherichia coli 0 (-655)
NCBITaxon:1319 0 (-469)
Candida albicans SC5314 0 (-397)
Severe acute respiratory syndrome-related coronavirus 0 (-249)
Bacillus subtilis 0 (-213)
Staphylococcus aureus subsp. aureus 0 (-138)
HIV-1 M:C_ETH2220 0 (-120)
NCBITaxon:467705 0 (-76)
Human orthopneumovirus 0 (-69)
Hepatitis B virus 0 (-56)
Human betaherpesvirus 5 0 (-19)
Rhizopus oryzae 0 (-12)
Staphylococcus saprophyticus 0 (-5)

Gene Function By Taxa

Production Query

Dev Query

source count
Total 3,006,245 (0)
Mus musculus 355,131 (0)
Homo sapiens 326,829 (+204)
Rattus norvegicus 318,456 (0)
Danio rerio 196,925 (0)
organism 185,741 (0)
Gallus gallus 158,818 (0)
Bos taurus 147,880 (+72)
Sus scrofa 129,427 (0)
Canis lupus familiaris 117,862 (0)
Caenorhabditis elegans 106,017 (0)
Drosophila melanogaster 103,427 (0)
Saccharomyces cerevisiae S288C 70,316 (0)
Aspergillus niger CBS 513.88 65,621 (0)
Dictyostelium discoideum 62,408 (0)
Aspergillus oryzae RIB40 59,307 (0)
Aspergillus nidulans FGSC A4 55,120 (0)
Aspergillus fumigatus 51,245 (0)
Xenopus tropicalis 34,900 (0)
NCBITaxon:46472 30,554 (0)
NCBITaxon:75750 30,039 (0)
Aspergillus flavus NRRL3357 27,713 (0)
Aspergillus brasiliensis CBS 101740 27,664 (0)
NCBITaxon:1137211 27,250 (0)
NCBITaxon:767770 26,734 (0)
NCBITaxon:1073089 26,567 (0)
Aspergillus kawachii IFO 4308 26,424 (0)
NCBITaxon:602072 26,382 (0)
NCBITaxon:41063 26,298 (0)
NCBITaxon:690307 25,102 (0)
Aspergillus fischeri NRRL 181 24,549 (0)
Aspergillus terreus NIH2624 24,494 (0)
Aspergillus fumigatus A1163 22,726 (0)
NCBITaxon:1160497 22,723 (0)
Aspergillus clavatus NRRL 1 21,976 (0)
Schizosaccharomyces pombe 972h- 21,475 (+20)
Schizosaccharomyces pombe 20,351 (-20)
Human immunodeficiency virus 1 409 (-201)
Hepacivirus C 101 (+58)
Human gammaherpesvirus 8 101 (+13)
Dengue virus group 97 (+43)
Listeria monocytogenes 92 (+92)
Vaccinia virus 89 (+17)
Human rhinovirus B3 79 (+79)
Staphylococcus aureus 73 (+34)
Mycobacterium tuberculosis 63 (+2)
Escherichia coli ATCC 25922 61 (+37)
Human alphaherpesvirus 3 60 (+60)
Hepatitis C virus subtype 2a 58 (+58)
Candida albicans 56 (+56)
Pseudomonas aeruginosa 53 (+25)
Pichia kudriavzevii 51 (0)
Bacillus megaterium 48 (-35)
Human gammaherpesvirus 4 46 (+46)
Human alphaherpesvirus 2 41 (+41)
Human alphaherpesvirus 1 40 (-2)
Jaagsiekte sheep retrovirus 30 (-32)
Hepatitis B virus 29 (-60)
Influenza A virus A
Salmonella 23 (+23)
Serratia marcescens 21 (+21)
Lactobacillus acidophilus 20 (+20)
Pseudomonas fluorescens 10 (+10)
Escherichia coli DH1 9 (-7)
Klebsiella pneumoniae 8 (+8)
Other 0 (0)
Escherichia coli 0 (-276)
HIV-1 M:C_ETH2220 0 (-96)
Severe acute respiratory syndrome-related coronavirus 0 (-63)
Staphylococcus aureus subsp. aureus 0 (-61)
NCBITaxon:1319 0 (-60)
Candida albicans SC5314 0 (-42)
Bacillus subtilis 0 (-36)
Human betaherpesvirus 5 0 (-18)
Staphylococcus saprophyticus 0 (-18)
Human orthopneumovirus 0 (-16)
NCBITaxon:467705 0 (-14)
Rhizopus oryzae 0 (-8)

Gene Anatomy By Taxa

Production Query

Dev Query

source count
Total 2,598,833 (0)
Homo sapiens 711,605 (+146)
Mus musculus 620,136 (0)
organism 471,594 (-28)
Danio rerio 368,939 (0)
Drosophila melanogaster 197,129 (0)
Rattus norvegicus 156,999 (0)
Caenorhabditis elegans 71,618 (0)
Human immunodeficiency virus 1 140 (-80)
Hepacivirus C 80 (+60)
Staphylococcus aureus 60 (+7)
Bacillus megaterium 40 (0)
Candida albicans 40 (+40)
Human alphaherpesvirus 3 40 (+40)
Pseudomonas aeruginosa 40 (+12)
Dengue virus group 20 (0)
Escherichia coli ATCC 25922 20 (0)
Hepatitis C virus subtype 2a 20 (+20)
Human alphaherpesvirus 1 20 (-20)
Human alphaherpesvirus 2 20 (+20)
Human gammaherpesvirus 4 20 (+20)
Human gammaherpesvirus 8 20 (0)
Human rhinovirus B3 20 (+20)
Influenza A virus A
Jaagsiekte sheep retrovirus 20 (0)
Lactobacillus acidophilus 20 (+20)
Listeria monocytogenes 20 (+20)
Mycobacterium tuberculosis 20 (0)
Pichia kudriavzevii 20 (0)
Salmonella 20 (+20)
Serratia marcescens 20 (+20)
Vaccinia virus 20 (+20)
Pseudomonas fluorescens 15 (+15)
Escherichia coli DH1 10 (-20)
Klebsiella pneumoniae 8 (+8)
Other 0 (0)
Escherichia coli 0 (-120)
Bacillus subtilis 0 (-40)
Candida albicans SC5314 0 (-20)
HIV-1 M:C_ETH2220 0 (-20)
Hepatitis B virus 0 (-20)
Human betaherpesvirus 5 0 (-20)
Human orthopneumovirus 0 (-20)
NCBITaxon:1319 0 (-20)
NCBITaxon:467705 0 (-20)
Rhizopus oryzae 0 (-20)
Severe acute respiratory syndrome-related coronavirus 0 (-20)
Staphylococcus aureus subsp. aureus 0 (-20)
Staphylococcus saprophyticus 0 (-20)

Genotype Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 507,177 (+408)
Mus musculus 373,984 (+316)
Danio rerio 122,476 (+91)
organism 9,042 (+1)
Mus mouse, genus 1,619 (0)
Mus musculus castaneus 14 (0)
Mus musculus molossinus 13 (0)
Mus musculus musculus x M. m. domesticus 12 (0)
Mus setulosus 8 (0)
Homo sapiens 3 (0)
Mus musculus musculus 3 (0)
Mus spretus 2 (0)
Mus musculus bactrianus 1 (0)
Other 0 (0)

Genotype Phenotype Associations By Source

Production Query

Dev Query

source count
Total 507,177 (+408)
mgi 350,496 (+317)
zfin 117,230 (+91)
impc 34,185 (0)
go 5,253 (0)
mgislim 10 (0)
coriell 3 (0)
Other 0 (0)

Model Disease Associations By Taxa

Production Query

Dev Query

species count
Total 33,240 (+18)
Homo sapiens 12,194 (+7)
Caenorhabditis elegans 9,174 (0)
Mus musculus 8,098 (+9)
Drosophila melanogaster 1,514 (0)
Danio rerio 1,161 (+1)
Canis lupus familiaris 685 (0)
organism 135 (0)
Bos taurus 115 (0)
Felis catus 55 (0)
Equus caballus 34 (0)
Caprinae 32 (0)
Mus mouse, genus 20 (0)
Sus scrofa 10 (0)
Gallus gallus 3 (0)
Other 3 (+1)
Bos 2 (0)
Mus musculus musculus x M. m. domesticus 2 (0)
Bovinae 1 (0)
Equus genus 1 (0)
Mus musculus castaneus 1 (0)

Model Disease Associations By Source

Production Query

Dev Query

source count
Total 33,240 (+18)
coriell 12,197 (+7)
wormbase 9,174 (0)
mgi 8,256 (+9)
flybase 1,514 (0)
zfin 1,164 (+2)
omia 935 (0)
Other 0 (0)

Disease Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 170,710 (0)
Other 170,710 (+179)
Homo sapiens 0 (-179)

Disease Phenotype Associations By Source

Production Query

Dev Query

species count
Total 170,710 (0)
hpoa 168,632 (0)
monarch 1,804 (0)
omia 221 (0)
Other 0 (0)

Variant Genotype Associations By Taxa

Production Query

Dev Query

species count
Total 627,130 (+381)
Mus musculus 540,551 (+167)
Danio rerio 77,634 (+206)
Homo sapiens 4,880 (+5)
organism 3,532 (+3)
Mus mouse, genus 490 (0)
Mus setulosus 13 (0)
Mus musculus molossinus 9 (0)
Mus musculus bactrianus 4 (0)
Rattus norvegicus 4 (0)
Mus musculus musculus 3 (0)
Mus spretus 3 (0)
Mus musculus castaneus 2 (0)
Bos taurus 1 (0)
Cricetulus griseus 1 (0)
Macaca mulatta 1 (0)
Plecturocebus moloch 1 (0)
Saguinus labiatus 1 (0)
Other 0 (0)

Variant Genotype Associations By Source

Production Query

Dev Query

source count
Total 627,130 (+381)
mmrrc 372,538 (+18)
mgi 173,471 (+162)
zfin 77,634 (+206)
impc 39,885 (0)
coriell 4,917 (+5)
udp 112 (0)
Other 0 (0)

Variant Phenotype Associations By Taxa

Production Query

Dev Query

species count
Total 1,018,807 (+320)
Mus musculus 436,601 (+356)
Drosophila melanogaster 142,278 (0)
Homo sapiens 128,157 (-116)
Bos taurus 109,095 (0)
Caenorhabditis elegans 108,238 (0)
Danio rerio 60,917 (+80)
Sus scrofa 16,585 (0)
Gallus gallus 8,204 (0)
Ovis aries 1,601 (0)
Equus caballus 1,322 (0)
Drosophila hydei 657 (0)
organism 643 (0)
Drosophila subobscura 602 (0)
Drosophila virilis 599 (0)
Drosophila ananassae 422 (0)
Drosophila pseudoobscura pseudoobscura 324 (0)
Drosophila simulans 283 (0)
Drosophila willistoni 258 (0)
Drosophila funebris 229 (0)
Drosophila americana texana 206 (0)
Drosophila robusta 156 (0)
Drosophila busckii 142 (0)
Drosophila immigrans 108 (0)
Drosophila americana americana 100 (0)
Drosophila kikkawai 95 (0)
Drosophila affinis 76 (0)
Drosophila mauritiana 76 (0)
Scaptomyza pallida 71 (0)
Drosophila prosaltans 68 (0)
Drosophila buzzatii 67 (0)
Drosophila miranda 65 (0)
Drosophila paulistorum 60 (0)
Zaprionus indianus 52 (0)
Drosophila littoralis 45 (0)
Drosophila persimilis 39 (0)
Drosophila bifasciata 35 (0)
Drosophila mojavensis 34 (0)
Drosophila ambigua 28 (0)
Drosophila transversa 22 (0)
Drosophila auraria 18 (0)
Drosophila biarmipes 18 (0)
Drosophila obscura 14 (0)
Drosophila phalerata 13 (0)
Drosophila bipectinata 11 (0)
Drosophila mercatorum mercatorum 11 (0)
Drosophila tropicalis 10 (0)
Drosophila malerkotliana 9 (0)
Drosophila mediopunctata 9 (0)
Drosophila sechellia 9 (0)
Drosophila takahashii 8 (0)
Drosophila aldrichi 7 (0)
Drosophila novamexicana 7 (0)
Drosophila repleta 7 (0)
Drosophila prostipennis 6 (0)
Drosophila albomicans 5 (0)
Drosophila crucigera 4 (0)
Drosophila elegans 4 (0)
Drosophila eugracilis 4 (0)
Drosophila gaucha 4 (0)
Drosophila pallidosa 4 (0)
Scaptodrosophila rufifrons 4 (0)
Drosophila equinoxialis 3 (0)
Drosophila melanica 3 (0)
Drosophila metzii 3 (0)
Drosophila nigromaculata 3 (0)
Drosophila pachea 3 (0)
Drosophila pseudoobscura bogotana 3 (0)
Chymomyza costata 2 (0)
Drosophila acutilabella 2 (0)
Drosophila arizonae 2 (0)
Drosophila cardini 2 (0)
Drosophila erecta 2 (0)
Drosophila falleni 2 (0)
Drosophila gibberosa 2 (0)
Drosophila madeirensis 2 (0)
Drosophila malerkotliana malerkotliana 2 (0)
Drosophila mimica 2 (0)
Drosophila nasuta 2 (0)
Drosophila nebulosa 2 (0)
Drosophila nigrospiracula 2 (0)
Drosophila similis similis 2 (0)
Drosophila tripunctata 2 (0)
Drosophila yakuba 2 (0)
Scaptodrosophila lebanonensis 2 (0)
Zaprionus sepsoides 2 (0)
Zaprionus tuberculatus 2 (0)
Drosophila ararama 1 (0)
Drosophila guttifera 1 (0)
Drosophila lutescens 1 (0)
Drosophila mulleri 1 (0)
Drosophila tristis 1 (0)
Other 0 (0)

Variant Phenotype Associations By Source

Production Query

Dev Query

source count
Total 1,018,807 (+320)
mgi 419,392 (+347)
flybase 147,500 (0)
animalqtldb 136,807 (0)
gwascatalog 124,553 (0)
wormbase 106,355 (0)
zfin 60,919 (+80)
mgislim 29,966 (+26)
go 22,446 (0)
impc 20,923 (0)
udp 3,411 (0)
clinvar 190 (0)
coriell 3 (0)
Other 0 (0)
hpoa 0 (-116)

Variant Disease Associations By Taxa

Production Query

Dev Query

species count
Total 174,251 (+4)
Homo sapiens 171,347 (+2)
Drosophila melanogaster 1,514 (0)
Mus musculus 1,390 (+2)
Other 0 (0)

Variant Disease Associations By Source

Production Query

Dev Query

source count
Total 174,251 (+4)
clinvar 132,280 (0)
gwascatalog 38,521 (0)
flybase 1,514 (0)
mgi 1,390 (+2)
coriell 472 (+2)
udp 60 (0)
omim 14 (0)
mgislim 3 (0)
Other 0 (0)

Publication Variant By Source

Production Query

Dev Query

source count
Total 5,550,114 (+2,411)
ncbigene 4,543,202 (+2,207)
animalqtldb 272,057 (0)
clinvar 201,935 (-5)
gwascatalog 143,432 (0)
flybase 136,888 (0)
mgi 92,493 (+51)
wormbase 54,929 (0)
zfin 46,474 (+83)
omim 45,024 (+56)
hgnc 32,157 (+6)
coriell 28,982 (+15)
go 18,260 (0)
kegg 6,309 (0)
omia 5,191 (0)
mgislim 4,900 (+1)
mmrrc 3,818 (+1)
biogrid 123 (0)
Other 0 (0)

Publication Gene By Source

Production Query

Dev Query

source count
Total 5,668,218 (+2,225)
ncbigene 4,435,845 (+2,206)
go 1,276,620 (+1)
biogrid 405,540 (0)
flybase 89,006 (0)
gwascatalog 88,599 (0)
sgd 86,791 (0)
zfin 73,320 (+33)
mgi 71,893 (+36)
clinvar 56,991 (-14)
mgislim 39,609 (+45)
wormbase 38,298 (0)
hgnc 31,435 (+6)
omim 29,634 (+30)
zfinslim 14,080 (+15)
mmrrc 10,320 (+4)
impc 7,095 (+1)
animalqtldb 5,170 (0)
rgd 202 (0)
hpoa 2 (-1)
Other 0 (0)

Publication Phenotype By Source

Production Query

Dev Query

source count
Total 5,668,218 (+2,225)
ncbigene 4,435,845 (+2,206)
go 1,276,620 (+1)
biogrid 405,540 (0)
flybase 89,006 (0)
gwascatalog 88,599 (0)
sgd 86,791 (0)
zfin 73,320 (+33)
mgi 71,893 (+36)
clinvar 56,991 (-14)
mgislim 39,609 (+45)
wormbase 38,298 (0)
hgnc 31,435 (+6)
omim 29,634 (+30)
zfinslim 14,080 (+15)
mmrrc 10,320 (+4)
impc 7,095 (+1)
animalqtldb 5,170 (0)
rgd 202 (0)
hpoa 2 (-1)
Other 0 (0)

Publication Genotype By Source

Production Query

Dev Query

source count
Total 127,239 (+104)
mgi 81,848 (+46)
zfin 31,360 (+42)
coriell 9,949 (+16)
go 4,082 (0)
Other 0 (0)

Publication Disease By Source

Production Query

Dev Query

source count
Total 357,558 (+185)
zfin 101,314 (+205)
ctd 91,881 (0)
clinvar 77,916 (0)
wormbase 47,030 (0)
go 34,877 (-2)
ncbigene 27,627 (-43)
mgi 14,170 (+18)
omia 13,942 (0)
flybase 4,371 (0)
coriell 4,079 (+7)
biogrid 3,597 (-13)
gwascatalog 2,599 (0)
hpoa 1,680 (0)
mgislim 768 (+1)
mmrrc 253 (0)
monarch 184 (0)
Other 0 (0)
hgnc 0 (-4)

Publication Model By Source

Production Query

Dev Query

source count
Total 59,566 (+31)
wormbase 24,871 (0)
go 19,073 (0)
mgi 15,116 (+18)
ncbigene 13,168 (0)
coriell 9,010 (+6)
flybase 4,578 (0)
zfin 3,356 (+7)
omia 2,635 (0)
biogrid 2,048 (0)
mgislim 799 (+1)
mmrrc 193 (0)
Other 0 (0)

Case Model By Source

Production Query

Dev Query

source count
coriell 30,603 (+13)
Total 30,603 (+13)
Other 0 (0)

Case Disease By Source

Production Query

Dev Query

source count
Total 0 (0)
Other 0 (0)

Case Variant By Source

Production Query

Dev Query

source count
udp 112 (0)
Total 112 (0)
Other 0 (0)

Case Genotype By Source

Production Query

Dev Query

source count
coriell 2,961 (+2)
Total 2,961 (+2)
Other 0 (0)

Case Gene By Source

Production Query

Dev Query

source count
omim 2 (0)
udp 2 (0)
Total 2 (0)
Other 0 (0)

Case Phenotype By Source

Production Query

Dev Query

source count
udp 1,075 (0)
Total 1,075 (0)
Other 0 (0)

Gene Pathway By Source

Production Query

Dev Query

source count
reactome 461,923 (0)
Total 461,923 (0)
ensembl 94,636 (0)
Other 0 (0)

Gene Pathway By Taxa

Production Query

Dev Query

source count
Total 461,923 (0)
organism 185,741 (0)
Homo sapiens 41,635 (+64)
Xenopus tropicalis 34,900 (0)
Mus musculus 30,074 (0)
Rattus norvegicus 28,359 (0)
Danio rerio 26,005 (0)
Canis lupus familiaris 25,797 (0)
Sus scrofa 25,591 (0)
Bos taurus 22,588 (+5)
Gallus gallus 15,812 (0)
Drosophila melanogaster 12,629 (0)
Caenorhabditis elegans 12,600 (0)
Human immunodeficiency virus 1 31 (-15)
Human gammaherpesvirus 8 19 (+8)
Dengue virus group 17 (+13)
Bacillus megaterium 15 (-38)
Pseudomonas aeruginosa 15 (+11)
Hepacivirus C 12 (+8)
Staphylococcus aureus 10 (+6)
Mycobacterium tuberculosis 9 (+1)
Human gammaherpesvirus 4 8 (+8)
Hepatitis C virus subtype 2a 7 (+7)
Vaccinia virus 7 (+2)
Human alphaherpesvirus 1 6 (+2)
Escherichia coli ATCC 25922 5 (+3)
Human rhinovirus B3 5 (+5)
Human alphaherpesvirus 2 3 (+3)
Human alphaherpesvirus 3 3 (+3)
Salmonella 3 (+3)
Candida albicans 2 (+2)
Escherichia coli DH1 2 (-2)
Klebsiella pneumoniae 2 (+2)
Listeria monocytogenes 2 (+2)
Pichia kudriavzevii 2 (0)
Serratia marcescens 2 (+2)
Hepatitis B virus 1 (-1)
Influenza A virus A
Jaagsiekte sheep retrovirus 1 (0)
Lactobacillus acidophilus 1 (+1)
Pseudomonas fluorescens 1 (+1)
Other 0 (0)
NCBITaxon:1319 0 (-41)
Escherichia coli 0 (-34)
HIV-1 M:C_ETH2220 0 (-8)
NCBITaxon:467705 0 (-6)
Staphylococcus aureus subsp. aureus 0 (-5)
Bacillus subtilis 0 (-4)
Severe acute respiratory syndrome-related coronavirus 0 (-4)
Candida albicans SC5314 0 (-2)
Human betaherpesvirus 5 0 (-1)
Human orthopneumovirus 0 (-1)
Staphylococcus saprophyticus 0 (-1)

Pathway Phenotype By Source

Production Query

Dev Query

source count
reactome 645,271 (+942)
Total 645,271 (+942)
ensembl 611,833 (+894)
mgi 482,144 (+605)
mgislim 406,179 (+822)
zfin 150,389 (+142)
zfinslim 95,913 (+127)
go 77,233 (+44)
mmrrc 68,247 (+5)
impc 38,854 (0)
rgd 1,404 (0)
hpoa 367 (0)
Other 0 (0)

Relations

Production Query

Dev Query

relation count
Total 35,508,486 (+8,312)
is_about 9,057,467 (+4,460)
interacts with 3,969,876 (-1)
in orthology relationship with 3,882,845 (+42)
in 1 to 1 orthology relationship with 3,169,516 (-42)
Source 3,043,215 (+735)
has phenotype 2,790,396 (+1,952)
expressed in 2,598,833 (0)
involved_in 2,080,719 (+6)
Other 1,625,075 (+760)
enables 747,677 (0)
is part of 670,726 (0)
is_allele_of 441,130 (+133)
has_affected_feature 401,798 (-4)
contributes to condition 259,984 (+8)
is marker for 137,206 (0)
colocalizes with 107,302 (+1)
mentions 101,275 (+171)
pathogenic_for_condition 95,648 (+2)
is_reference_allele_of 60,375 (0)
is_expression_variant_of 53,175 (0)
has role in modeling 44,171 (+28)
has_genotype 42,283 (+20)
likely_pathogenic_for_condition 36,923 (-2)
genetically interacts with 33,071 (0)
derives_from 30,603 (+13)
targets_gene 17,802 (+24)
causes condition 4,955 (+2)
is causal germline mutation in 2,164 (-1)
contributes to 1,075 (+4)
is causal loss of function germline mutation of in 466 (0)
is causal susceptibility factor for 436 (+1)
is causal somatic mutation in 145 (0)
is causal gain of function germline mutation of in 69 (0)
disease has basis in feature 53 (0)
is causal germline mutation partially giving rise to 30 (0)
is_variant_allele_of 2 (0)